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1

Interplay of adaptive capabilities of Halomonas sp. AAD12 under salt stress

Selim Ceylan, Gulsah Yilan, Berna Sariyar Akbulut, Annarita Poli, Dilek Kazan

Journal:

Journal of Bioscience and Bioengineering

Year:

2012

Language:

english

File:

PDF, 433 KB

english, 2012

2

Investigation of the in vivo interaction between β-lactamaseand its inhibitor protein

BÜDEYRİ GÖKGÖZ, Nilay, YALAZ, Simay, AVCI, Naze Gül, BULDUM, Gizem, ÖZKIRIMLI ÖLMEZ, Elif, SARIYAR AKBULUT, Berna

Journal:

TURKISH JOURNAL OF BIOLOGY

Year:

2015

Language:

english

File:

PDF, 1.26 MB

english, 2015

3

Potentiating the activity of berberine for Staphylococcus aureus in a combinatorial treatment with thymol

Aksoy, Cemile Selin, Avci, Fatma Gizem, Ugurel, Osman Mutluhan, Atas, Basak, Sayar, Nihat Alpagu, Akbulut, Berna Sariyar

Journal:

Microbial Pathogenesis

Year:

2020

File:

PDF, 4.36 MB

2020

4

Proteomic response ofEscherichia colito the alkaloid extract ofPapaver polychaetum

Çağakan Ozbalci, Çağlayan Unsal, Dilek Kazan, Berna Sariyar-Akbulut

Journal:

Annals of Microbiology

Year:

2010

Language:

english

File:

PDF, 689 KB

english, 2010

5

pVEC hydrophobic N-terminus is critical for antibacterial activity

Alaybeyoglu, Begum, Sariyar Akbulut, Berna, Ozkirimli, Elif

Journal:

Journal of Peptide Science

Year:

2018

Language:

english

File:

PDF, 790 KB

english, 2018

6

A novel chimeric peptide with antimicrobial activity

Alaybeyoglu, Begum, Sariyar Akbulut, Berna, Ozkirimli, Elif

Journal:

Journal of Peptide Science

Year:

2015

Language:

english

File:

PDF, 381 KB

english, 2015

7

Insights into Membrane Translocation of the Cell-Penetrating Peptide pVEC from Molecular Dynamics Calculations

Alaybeyoglu, Begum, Sariyar Akbulut, Berna, Ozkirimli, Elif

Journal:

Journal of Biomolecular Structure and Dynamics

Year:

2015

Language:

english

File:

PDF, 753 KB

english, 2015

8

Identification of novel inhibitors of the ABC transporter BmrA

SerÃ§inoÄlu, Onur, Senturk, Duygu, Ece Altinisik Kaya, Fatma, Gizem Avci, Fatma, Frlan, Rok, TomaÅ¡iÄ, Tihomir, Ozbek, Pemra, Orelle, CÃ©dric, Jault, Jean-Michel, Sariyar Akbulut, Berna

Journal:

Bioorganic Chemistry

Year:

2020

File:

PDF, 232 KB

2020

9

Rapid differentiation of new isolates with MALDI-TOF mass spectrometry via discriminant function analysis based on principal components

Berna Sariyar-Akbulut

Journal:

Korean Journal of Chemical Engineering

Year:

2009

Language:

english

File:

PDF, 788 KB

english, 2009

10

[IEEE 2010 5th International Symposium on Health Informatics and Bioinformatics - Ankara, Turkey (2010.04.20-2010.04.22)] 2010 5th International Symposium on Health Informatics and Bioinformatics - Investigation of TEM-1 and SHV-1 beta-lactamase ligand binding

Kanlikilicer, Pinar, Ozkirimli Olmez, Elif, Budeyri, Nilay, Akbulut, Berna Sariyar

Year:

2010

Language:

english

File:

PDF, 3.83 MB

english, 2010

11

Preliminary phenotypic characterization of newly isolated halophilic microorganisms by footprinting: a rapid metabolome analysis

Berna Sarıyar-Akbulut, Aydan Salman-Dilgimen, Selim Ceylan, Sinem Perk, Akın A. Denizci, Dilek Kazan

Journal:

Archives of Microbiology

Year:

2008

Language:

english

File:

PDF, 492 KB

english, 2008

12

Purification and characterization of a thermo and acid-stable endo-1,3-1,4-β-glucanase from Bacillus amyliquefaciens YMNg47

Duman, Yonca Avcı, Korkmaz, Hatice, Arikan, Burhan, Dinçer, Sadık, Denizci, A. Akın, Akbulut, Berna Sarıyar, Kazan, Dilek, Erarslan, Altan

Journal:

New Biotechnology

Year:

2012

Language:

english

File:

PDF, 90 KB

english, 2012

13

Adaptive changes in the lipid distribution of a moderately halophilic microorganism under salt stress

Ozturk, H. Umit, Ozturk, Nurcin Celik, Poli, Annarita, Nicolaus, Barbara, Ayan, Burak, Denizci, A. Akin, Utkan, Guldem, Akbulut, Berna Sariyar, Kazan, Dilek

Journal:

New Biotechnology

Year:

2012

Language:

english

File:

PDF, 62 KB

english, 2012

14

Targeting a hidden site on class A beta-lactamases

Avci, Fatma Gizem, Altinisik, Fatma Ece, Karacan, Ipek, Karagoz, Duygu Senturk, Ersahin, Serhat, Eren, Ayse, Sayar, Nihat Alpagu, Vardar Ulu, Didem, Ozkirimli Olmez, Elif, Sariyar Akbulut, Berna

Journal:

Journal of Molecular Graphics and Modelling

Year:

2018

Language:

english

File:

PDF, 1.76 MB

english, 2018

15

Assessment of Berberine as a Multi-target Antimicrobial: A Multi-omics Study for Drug Discovery and Repositioning

Karaosmanoglu, Kubra, Sayar, Nihat Alpagu, Kurnaz, Isil Aksan, Akbulut, Berna Sariyar

Journal:

Omics A Journal of Integrative Biology

Year:

2014

Language:

english

File:

PDF, 320 KB

english, 2014

16

An evolutionarily conserved allosteric site modulates beta-lactamase activity

Avci, Fatma Gizem, Altinisik, Fatma Ece, Vardar Ulu, Didem, Ozkirimli Olmez, Elif, Sariyar Akbulut, Berna

Journal:

Journal of Enzyme Inhibition and Medicinal Chemistry

Year:

2016

Language:

english

File:

PDF, 608 KB

english, 2016

17

Response of Escherichia coli to Prolonged Berberine Exposure

Budeyri Gokgoz, Nilay, Avci, Fatma Gizem, Yoneten, Kubra Karaosmanoglu, Alaybeyoglu, Begum, Ozkirimli, Elif, Sayar, Nihat Alpagu, Kazan, Dilek, Sariyar Akbulut, Berna

Journal:

Microbial Drug Resistance

Year:

2016

Language:

english

File:

PDF, 690 KB

english, 2016

18

Proteomics Evidence for the Activity of the Putative Antibacterial Plant Alkaloid (-)-Roemerine: Mainstreaming Omics-Guided Drug Discovery

Gokgoz, Nilay Budeyri, Akbulut, Berna Sariyar

Journal:

Omics A Journal of Integrative Biology

Year:

2015

Language:

english

File:

PDF, 419 KB

english, 2015

19

The effect of a beta-lactamase inhibitor peptide on bacterial membrane structure and integrity: a comparative study

Alaybeyoglu, Begum, Uluocak, Bilge Gedik, Akbulut, Berna Sariyar, Ozkirimli, Elif

Journal:

Journal of Peptide Science

Year:

2017

Language:

english

File:

PDF, 642 KB

english, 2017

20

Retro-techno-economic evaluation of acetic acid production using cotton stalk as feedstock

Sayar, Nihat Alpagu, Kazan, Dilek, Pinar, Orkun, Akbulut, Berna Sarıyar, Sayar, Ahmet Alp

Journal:

Journal of Material Cycles and Waste Management

Year:

2018

Language:

english

File:

PDF, 1.17 MB

english, 2018

21

Proteomic insight into phenolic adaptation of a moderately halophilic Halomonas sp. strain AAD12

Ceylan, Selim, Akbulut, Berna Sarıyar, Denizci, Aziz Akın, Kazan, Dilek

Journal:

Canadian Journal of Microbiology

Year:

2011

File:

PDF, 211 KB

2011

22

An OMIC approach to elaborate the antibacterial mechanisms of different alkaloids

Avci, Fatma Gizem, Sayar, Nihat Alpagu, Sariyar Akbulut, Berna

Journal:

Year:

2018

Language:

english

File:

PDF, 1.14 MB

english, 2018

23

Proteomics in industrial biotechnology

Selim Ceylan, Cagakan Ozbalcı, Berna Sarıyar Akbulut, Dilek Kazan

Journal:

Current Opinion in Biotechnology

Year:

2011

Language:

english

File:

PDF, 74 KB

english, 2011

24

The importance of a conserved residue of the H10 helix in β-lactamase

Avcı, Fatma Gizem, Ölmez, Elif Özkırımlı, Akbulut, Berna Sarıyar

Journal:

New Biotechnology

Year:

2014

Language:

english

File:

PDF, 55 KB

english, 2014

25

[IEEE 2009 14th National Biomedical Engineering Meeting - Izmir, Turkey (2009.05.20-2009.05.22)] 2009 14th National Biomedical Engineering Meeting - Dynamic analysis of ß lactamase ligand interaction

Kanlikilicer, Pinar, Budeyri, Nilay, Akbulut, Berna Sariyar, Hortacsu, Amable, Ozkirimli Olmez, Elif

Year:

2009

Language:

turkish

File:

PDF, 926 KB

turkish, 2009

26

Membrane Active Peptides and Their Biophysical Characterization

Avci, Fatma Gizem, Akbulut, Berna Sariyar, Ozkirimli, Elif

Journal:

Year:

2018

Language:

english

File:

PDF, 4.16 MB

english, 2018

27

Dynamic Analysis of Beta-lactamase Ligand Recognition

Kanlikilicer, Pinar, Budeyri, Nilay, Akbulut, Berna Sariyar, Hortacsu, Amable, Ozkirimli, Elif

Journal:

Biophysical Journal

Year:

2009

Language:

english

File:

PDF, 70 KB

english, 2009

28

What Are the Multi-Omics Mechanisms for Adaptation by Microorganisms to High Alkalinity? A Transcriptomic and Proteomic Study of a Bacillus Strain with Industrial Potential

Altinisik Kaya, Fatma Ece, Avci, Fatma Gizem, Sayar, Nihat Alpagu, Kazan, Dilek, Sayar, Ahmet Alp, Sariyar Akbulut, Berna

Journal:

Omics A Journal of Integrative Biology

Year:

2018

Language:

english

File:

PDF, 316 KB

english, 2018

29

Osmoadaptation of a moderately halophilic microorganisms under cold stress

Ayan, Burak, Akbulut, Berna Sariyar, Poli, Annarita, Ozturk, Umit, Ozturk, Nurcin Celik, Denizci, A. Akin, Utkan, Guldem, Kazan, Dilek

Journal:

New Biotechnology

Year:

2012

Language:

english

File:

PDF, 82 KB

english, 2012

30

A method for the quantitative determination of glycerophospholipid regioisomers by UPLC-ESI-MS/MS

Wozny, Katharina, Lehmann, Wolf D., Wozny, Manfred, Akbulut, Berna Sariyar, Brügger, Britta

Journal:

Analytical and Bioanalytical Chemistry

Year:

2018

Language:

english

File:

PDF, 2.06 MB

english, 2018

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